Data Scientist in Image AnalysisEmployerUniversity of BerneWork LocationEmployment fraction80% - 100%Type of contracttemporaryJob tasksThe Department for Biomedical Research (DBMR) is launching a new Biological Data Science Hub and invites applications for a Data Scientist specialized in image analysis. This is a unique opportunity to take on a leadership role in shaping the future of data-driven biomedical research at the University of Bern and beyond.About the HubThe Biological Data Science Hub has three key missions:● Education: Empowering labs to adopt cutting-edge data science methods by training PhDs and postdocs and embedding best practices directly in research groups.● Community: Building a strong data science culture through regular meetings, collaborations with national and international partners, and yearly symposia.● Open Data: Promoting FAIR data practices, sharing code, and fostering reproducible, cost-efficient research.As a pillar leader in image analysis, you will play a central role in advancing these missions.Your RoleWe are seeking a scientist with expertise in biological image analysis who can combine technical excellence with vision and initiative. In this role, you will:● Lead the image analysis pillar of the Hub, bringing independence and initiative.● Design and implement state-of-the-art pipelines for biological imaging data.● Curate, collect, and manage datasets, contributing to the creation of a university-wide repository.● Guide and mentor researchers across DBMR labs in best practices and advanced image-analysis methods.● Organize training sessions, workshops, and community events.● Represent the Hub nationally and internationally by promoting our activities at conferences and building collaborations.● Contribute to setting standards for FAIR and reproducible data science.Profile requirementsYour Profile● PhD or MSc in computer science, biomedical image analysis, or a related field.● Expertise in image data science, including machine learning and deep learning.● Strong programming skills (Python required; R or similar desirable).● Experience in HPC/Linux environmentsand data-parallel processing.● Ability to work independently, take initiative, and lead projects.● Excellent communication and mentoring skills, with a collaborative mindset.Desirable:● Experience with microscopy image analysis (high-content screening, EM, light-sheet, confocal, etc.).● Familiarity with tools such as Fiji, CellProfiler, Napari.● Experience in collaborative software development.● Background in research or clinical data environments.We Offer● A 3-year fully funded position (80-100%).● A leadership role in a newly established, high-impact initiative.● Opportunities for career development and visibility within Switzerland's leading biomedical and data science networks (EPFL AI Center, SIB, NCCR RNA & Disease, Zurich Vision Center).● A dynamic, international, and interdisciplinary environment within the Faculty of Medicine.● A supportive, collaborative team of experts in AI, data analysis, and computational biology.● Competitive salary and benefits.Practical Information● Start date: As soon as possible● Contract type 1-year renewable (up to 3 years)● Activity rate: 80-100%How to applyIf you are interested in this challenging and highly interesting position, please send your application including CV, letter of motivation and names and contact details of 1-3 referees to .
